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      Wide-Field Pixel Super-Resolution Colour Lensfree Microscope for Digital Pathology

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          Abstract

          Whole slide imaging enables scanning entire stained-glass slides with high resolution into digital images for the tissue morphology/molecular pathology assessment and analysis, which has increased in adoption for both clinical and research applications. As an alternative to conventional optical microscopy, lensfree holography imaging, which offers high resolution and a wide field of view (FOV) with digital focus, has been widely used in various types of biomedical imaging. However, accurate colour holographic imaging with pixel super-resolution reconstruction has remained a great challenge due to its coherent characteristic. In this work, we propose a wide-field pixel super-resolution colour lensfree microscopy by performing wavelength scanning pixel super-resolution and phase retrieval simultaneously on the three channels of red, green and blue (RGB), respectively. High-resolution RGB three-channel composite colour image is converted to the YUV space for separating the colour component and the brightness component, keeping the brightness component unchanged as well as enhancing the colour component through average filter, which not only eliminates the common rainbow artifacts of holographic colour reconstruction but also maintains the high-resolution details collected under different colour illuminations. We conducted experiments on the reconstruction of a USAF1951, stained lotus root and red bone marrow smear for performance evaluation of the spatial resolution and colour reconstruction with an imaging FOV >40 mm 2.

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          Compact, light-weight and cost-effective microscope based on lensless incoherent holography for telemedicine applications.

          Despite the rapid progress in optical imaging, most of the advanced microscopy modalities still require complex and costly set-ups that unfortunately limit their use beyond well equipped laboratories. In the meantime, microscopy in resource-limited settings has requirements significantly different from those encountered in advanced laboratories, and such imaging devices should be cost-effective, compact, light-weight and appropriately accurate and simple to be usable by minimally trained personnel. Furthermore, these portable microscopes should ideally be digitally integrated as part of a telemedicine network that connects various mobile health-care providers to a central laboratory or hospital. Toward this end, here we demonstrate a lensless on-chip microscope weighing approximately 46 grams with dimensions smaller than 4.2 cm x 4.2 cm x 5.8 cm that achieves sub-cellular resolution over a large field of view of approximately 24 mm(2). This compact and light-weight microscope is based on digital in-line holography and does not need any lenses, bulky optical/mechanical components or coherent sources such as lasers. Instead, it utilizes a simple light-emitting-diode (LED) and a compact opto-electronic sensor-array to record lensless holograms of the objects, which then permits rapid digital reconstruction of regular transmission or differential interference contrast (DIC) images of the objects. Because this lensless incoherent holographic microscope has orders-of-magnitude improved light collection efficiency and is very robust to mechanical misalignments it may offer a cost-effective tool especially for telemedicine applications involving various global health problems in resource limited settings.
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            Whole Slide Imaging Versus Microscopy for Primary Diagnosis in Surgical Pathology

            Most prior studies of primary diagnosis in surgical pathology using whole slide imaging (WSI) versus microscopy have focused on specific organ systems or included relatively few cases. The objective of this study was to demonstrate that WSI is noninferior to microscopy for primary diagnosis in surgical pathology. A blinded randomized noninferiority study was conducted across the entire range of surgical pathology cases (biopsies and resections, including hematoxylin and eosin, immunohistochemistry, and special stains) from 4 institutions using the original sign-out diagnosis (baseline diagnosis) as the reference standard. Cases were scanned, converted to WSI and randomized. Sixteen pathologists interpreted cases by microscopy or WSI, followed by a wash-out period of ≥4 weeks, after which cases were read by the same observers using the other modality. Major discordances were identified by an adjudication panel, and the differences between major discordance rates for both microscopy (against the reference standard) and WSI (against the reference standard) were calculated. A total of 1992 cases were included, resulting in 15,925 reads. The major discordance rate with the reference standard diagnosis was 4.9% for WSI and 4.6% for microscopy. The difference between major discordance rates for microscopy and WSI was 0.4% (95% confidence interval, −0.30% to 1.01%). The difference in major discordance rates for WSI and microscopy was highest in endocrine pathology (1.8%), neoplastic kidney pathology (1.5%), urinary bladder pathology (1.3%), and gynecologic pathology (1.2%). Detailed analysis of these cases revealed no instances where interpretation by WSI was consistently inaccurate compared with microscopy for multiple observers. We conclude that WSI is noninferior to microscopy for primary diagnosis in surgical pathology, including biopsies and resections stained with hematoxylin and eosin, immunohistochemistry and special stains. This conclusion is valid across a wide variety of organ systems and specimen types.
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              A Practical Guide to Whole Slide Imaging: A White Paper From the Digital Pathology Association

              Whole slide imaging (WSI) represents a paradigm shift in pathology, serving as a necessary first step for a wide array of digital tools to enter the field. Its basic function is to digitize glass slides, but its impact on pathology workflows, reproducibility, dissemination of educational material, expansion of service to underprivileged areas, and intrainstitutional and interinstitutional collaboration exemplifies a significant innovative movement with far-reaching effects. Although the benefits of WSI to pathology practices, academic centers, and research institutions are many, the complexities of implementation remain an obstacle to widespread adoption. In the wake of the first regulatory clearance of WSI for primary diagnosis in the United States, some barriers to adoption have fallen. Nevertheless, implementation of WSI remains a difficult prospect for many institutions, especially those with stakeholders unfamiliar with the technologies necessary to implement a system or who cannot effectively communicate to executive leadership and sponsors the benefits of a technology that may lack clear and immediate reimbursement opportunity.
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                Author and article information

                Contributors
                Journal
                Front Oncol
                Front Oncol
                Front. Oncol.
                Frontiers in Oncology
                Frontiers Media S.A.
                2234-943X
                26 October 2021
                2021
                : 11
                : 751223
                Affiliations
                [1] Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences , Shenzhen, China
                Author notes

                Edited by: Guanglei Zhang, Beihang University, China

                Reviewed by: Zhicheng Zhang, Stanford University, United States; Wei Zhao, Stanford University, United States

                *Correspondence: Wenjian Qin, wj.qin@ 123456siat.ac.cn

                This article was submitted to Cancer Imaging and Image-directed Interventions, a section of the journal Frontiers in Oncology

                Article
                10.3389/fonc.2021.751223
                8576372
                2fb2e275-32f1-49bc-a2c2-ca0e867ace9f
                Copyright © 2021 Zeng, He and Qin

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 31 July 2021
                : 04 October 2021
                Page count
                Figures: 6, Tables: 0, Equations: 2, References: 31, Pages: 10, Words: 4440
                Categories
                Oncology
                Original Research

                Oncology & Radiotherapy
                pixel super-resolution,digital pathology,wide field of view,colour holography,lensfree holography

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