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      Intramolecular 13C analysis of tree rings provides multiple plant ecophysiology signals covering decades

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          Abstract

          Measurements of carbon isotope contents of plant organic matter provide important information in diverse fields such as plant breeding, ecophysiology, biogeochemistry and paleoclimatology. They are currently based on 13C/ 12C ratios of specific, whole metabolites, but we show here that intramolecular ratios provide higher resolution information. In the glucose units of tree-ring cellulose of 12 tree species, we detected large differences in 13C/ 12C ratios (>10‰) among carbon atoms, which provide isotopically distinct inputs to major global C pools, including wood and soil organic matter. Thus, considering position-specific differences can improve characterisation of soil-to-atmosphere carbon fluxes and soil metabolism. In a Pinus nigra tree-ring archive formed from 1961 to 1995, we found novel 13C signals, and show that intramolecular analysis enables more comprehensive and precise signal extraction from tree rings, and thus higher resolution reconstruction of plants’ responses to climate change. Moreover, we propose an ecophysiological mechanism for the introduction of a 13C signal, which links an environmental shift to the triggered metabolic shift and its intramolecular 13C signature. In conclusion, intramolecular 13C analyses can provide valuable new information about long-term metabolic dynamics for numerous applications.

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          Hierarchical Grouping to Optimize an Objective Function

          Joe Ward (1963)
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            Living in a fungal world: impact of fungi on soil bacterial niche development.

            The colonization of land by plants appears to have coincided with the appearance of mycorrhiza-like fungi. Over evolutionary time, fungi have maintained their prominent role in the formation of mycorrhizal associations. In addition, however, they have been able to occupy other terrestrial niches of which the decomposition of recalcitrant organic matter is perhaps the most remarkable. This implies that, in contrast to that of aquatic organic matter decomposition, bacteria have not been able to monopolize decomposition processes in terrestrial ecosystems. The emergence of fungi in terrestrial ecosystems must have had a strong impact on the evolution of terrestrial bacteria. On the one hand, potential decomposition niches, e.g. lignin degradation, have been lost for bacteria, whereas on the other hand the presence of fungi has itself created new bacterial niches. Confrontation between bacteria and fungi is ongoing, and from studying contemporary interactions, we can learn about the impact that fungi presently have, and have had in the past, on the ecology and evolution of terrestrial bacteria. In the first part of this review, the focus is on niche differentiation between soil bacteria and fungi involved in the decomposition of plant-derived organic matter. Bacteria and fungi are seen to compete for simple plant-derived substrates and have developed antagonistic strategies. For more recalcitrant organic substrates, e.g. cellulose and lignin, both competitive and mutualistic strategies appear to have evolved. In the second part of the review, bacterial niches with respect to the utilization of fungal-derived substrates are considered. Here, several lines of development can be recognized, ranging from mutualistic exudate-consuming bacteria that are associated with fungal surfaces to endosymbiotic and mycophagous bacteria. In some cases, there are indications of fungal specific selection in fungus-associated bacteria, and possible mechanisms for such selection are discussed.
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              Isotopic Composition of Plant Carbon Correlates With Water-Use Efficiency of Wheat Genotypes

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                Author and article information

                Contributors
                thomas.wieloch@umu.se
                jurgen.schleucher@umu.se
                Journal
                Sci Rep
                Sci Rep
                Scientific Reports
                Nature Publishing Group UK (London )
                2045-2322
                22 March 2018
                22 March 2018
                2018
                : 8
                : 5048
                Affiliations
                [1 ]ISNI 0000 0001 1034 3451, GRID grid.12650.30, Department of Medical Biochemistry and Biophysics, , Umeå University, ; 90187 Umeå, Sweden
                [2 ]ISNI 0000 0001 1034 3451, GRID grid.12650.30, Department of Mathematics and Mathematical Statistics, , Umeå University, ; 90187 Umeå, Sweden
                [3 ]ISNI 0000 0001 2168 186X, GRID grid.134563.6, Laboratory of Tree-Ring Research, , University of Arizona, ; 85721-0045 Tucson, USA
                [4 ]ISNI 0000 0001 2298 5320, GRID grid.5173.0, Institute of Wood Science and Technology, , University of Natural Resources and Life Sciences Vienna, ; 3430 Tulln an der Donau, Austria
                [5 ]ISNI 0000 0001 2259 5533, GRID grid.419754.a, Forest Dynamics, , Swiss Federal Research Institute WSL, ; 8903 Birmensdorf, Switzerland
                [6 ]ISNI 0000 0001 2156 2780, GRID grid.5801.c, Institute of Terrestrial Ecosystems, , ETH Zurich, ; 8092 Zürich, Switzerland
                Author information
                http://orcid.org/0000-0002-5220-721X
                Article
                23422
                10.1038/s41598-018-23422-2
                5864875
                29567963
                f3e067ee-3944-41a1-9d22-65f864e7390c
                © The Author(s) 2018

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 23 October 2017
                : 12 March 2018
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