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      Overview of the Antimicrobial Compounds Produced by Members of the Bacillus subtilis Group

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          Abstract

          Over the last seven decades, applications using members of the Bacillus subtilis group have emerged in both food processes and crop protection industries. Their ability to form survival endospores and the plethora of antimicrobial compounds they produce has generated an increased industrial interest as food preservatives, therapeutic agents and biopesticides. In the growing context of food biopreservation and biological crop protection, this review suggests a comprehensive way to visualize the antimicrobial spectrum described within the B. subtilis group, including volatile compounds. This classification distinguishes the bioactive metabolites based on their biosynthetic pathways and chemical nature: i.e., ribosomal peptides (RPs), volatile compounds, polyketides (PKs), non-ribosomal peptides (NRPs), and hybrids between PKs and NRPs. For each clade, the chemical structure, biosynthesis and antimicrobial activity are described and exemplified. This review aims at constituting a convenient and updated classification of antimicrobial metabolites from the B. subtilis group, whose complex phylogeny is prone to further development.

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          Most cited references209

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          Bacillus lipopeptides: versatile weapons for plant disease biocontrol.

          In the context of biocontrol of plant diseases, the three families of Bacillus lipopeptides - surfactins, iturins and fengycins were at first mostly studied for their antagonistic activity for a wide range of potential phytopathogens, including bacteria, fungi and oomycetes. Recent investigations have shed light on the fact that these lipopeptides can also influence the ecological fitness of the producing strain in terms of root colonization (and thereby persistence in the rhizosphere) and also have a key role in the beneficial interaction of Bacillus species with plants by stimulating host defence mechanisms. The different structural traits and physico-chemical properties of these effective surface- and membrane-active amphiphilic biomolecules explain their involvement in most of the mechanisms developed by bacteria for the biocontrol of different plant pathogens.
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            Bacteriocins: developing innate immunity for food.

            Bacteriocins are bacterially produced antimicrobial peptides with narrow or broad host ranges. Many bacteriocins are produced by food-grade lactic acid bacteria, a phenomenon which offers food scientists the possibility of directing or preventing the development of specific bacterial species in food. This can be particularly useful in preservation or food safety applications, but also has implications for the development of desirable flora in fermented food. In this sense, bacteriocins can be used to confer a rudimentary form of innate immunity to foodstuffs, helping processors extend their control over the food flora long after manufacture.
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              Bacillus subtilis antibiotics: structures, syntheses and specific functions.

              The endospore-forming rhizobacterium Bacillus subtilis- the model system for Gram-positive organisms, is able to produce more than two dozen antibiotics with an amazing variety of structures. The produced anti-microbial active compounds include predominantly peptides that are either ribosomally synthesized and post-translationally modified (lantibiotics and lantibiotic-like peptides) or non-ribosomally generated, as well as a couple of non-peptidic compounds such as polyketides, an aminosugar, and a phospholipid. Here I summarize the structures of all known B. subtilis antibiotics, their biochemistry and genetic analysis of their biosyntheses. An updated summary of well-studied antibiotic regulation pathways is given. Furthermore, current findings are resumed that show roles for distinct B. subtilis antibiotics beyond the "pure" anti-microbial action: Non-ribosomally produced lipopeptides are involved in biofilm and swarming development, lantibiotics function as pheromones in quorum-sensing, and a "killing factor" effectuates programmed cell death in sister cells. A discussion of how these antibiotics may contribute to the survival of B. subtilis in its natural environment is given.
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                Author and article information

                Contributors
                Journal
                Front Microbiol
                Front Microbiol
                Front. Microbiol.
                Frontiers in Microbiology
                Frontiers Media S.A.
                1664-302X
                26 February 2019
                2019
                : 10
                : 302
                Affiliations
                [1] 1Laboratory of Food and Environmental Microbiology, Earth and Life Institute, Université catholique de Louvain , Louvain-la-Neuve, Belgium
                [2] 2Laboratory of Phytopathology-Applied Microbiology, Earth and Life Institute, Université catholique de Louvain , Louvain-la-Neuve, Belgium
                Author notes

                Edited by: José E. Barboza-Corona, Universidad de Guanajuato, Mexico

                Reviewed by: Stefan Junne, Technische Universität Berlin, Germany; Jeongdae Im, Kansas State University, United States

                *Correspondence: Claude Bragard, claude.bragard@ 123456uclouvain.be Jacques Mahillon, jacques.mahillon@ 123456uclouvain.be

                These authors have contributed equally to this work

                This article was submitted to Microbiotechnology, Ecotoxicology and Bioremediation, a section of the journal Frontiers in Microbiology

                Article
                10.3389/fmicb.2019.00302
                6401651
                30873135
                d14f327a-543c-459c-a768-1790e47ebdd4
                Copyright © 2019 Caulier, Nannan, Gillis, Licciardi, Bragard and Mahillon.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 05 November 2018
                : 05 February 2019
                Page count
                Figures: 8, Tables: 4, Equations: 0, References: 246, Pages: 19, Words: 0
                Categories
                Microbiology
                Review

                Microbiology & Virology
                bacillus subtilis group,bacteriocins,biocontrol,biosynthetic pathways,lipopeptides,polyketides,siderophores,volatile

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