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      Time-Resolved Spectroscopy of Fluorescence Quenching in Optical Fibre-Based pH Sensors

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          Abstract

          Numerous optodes, with fluorophores as the chemical sensing element and optical fibres for light delivery and collection, have been fabricated for minimally invasive endoscopic measurements of key physiological parameters such as pH. These flexible miniaturised optodes have typically attempted to maximize signal-to-noise through the application of high concentrations of fluorophores. We show that high-density attachment of carboxyfluorescein onto silica microspheres, the sensing elements, results in fluorescence energy transfer, manifesting as reduced fluorescence intensity and lifetime in addition to spectral changes. We demonstrate that the change in fluorescence intensity of carboxyfluorescein with pH in this “high-density” regime is opposite to that normally observed, with complex variations in fluorescent lifetime across the emission spectra of coupled fluorophores. Improved understanding of such highly loaded sensor beads is important because it leads to large increases in photostability and will aid the development of compact fibre probes, suitable for clinical applications. The time-resolved spectral measurement techniques presented here can be further applied to similar studies of other optodes.

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          Most cited references33

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          New strategies for fluorescent probe design in medical diagnostic imaging.

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            FRET imaging.

            Förster (or Fluorescence) Resonance Energy Transfer (FRET) is unique in generating fluorescence signals sensitive to molecular conformation, association, and separation in the 1-10 nm range. We introduce a revised photophysical framework for the phenomenon and provide a systematic catalog of FRET techniques adapted to imaging systems, including new approaches proposed as suitable prospects for implementation. Applications extending from a single molecule to live cells will benefit from multidimensional microscopy techniques, particularly those adapted for optical sectioning and incorporating new algorithms for resolving the component contributions to images of complex molecular systems.
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              A practical guide to single-molecule FRET.

              Single-molecule fluorescence resonance energy transfer (smFRET) is one of the most general and adaptable single-molecule techniques. Despite the explosive growth in the application of smFRET to answer biological questions in the last decade, the technique has been practiced mostly by biophysicists. We provide a practical guide to using smFRET, focusing on the study of immobilized molecules that allow measurements of single-molecule reaction trajectories from 1 ms to many minutes. We discuss issues a biologist must consider to conduct successful smFRET experiments, including experimental design, sample preparation, single-molecule detection and data analysis. We also describe how a smFRET-capable instrument can be built at a reasonable cost with off-the-shelf components and operated reliably using well-established protocols and freely available software.
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                Author and article information

                Journal
                Sensors (Basel)
                Sensors (Basel)
                sensors
                Sensors (Basel, Switzerland)
                MDPI
                1424-8220
                27 October 2020
                November 2020
                : 20
                : 21
                : 6115
                Affiliations
                [1 ]Scottish Universities Physics Alliance (SUPA), Institute of Photonics and Quantum Sciences, Heriot-Watt University, Edinburgh EH14 4AS, UK; d.choudhury.hw@ 123456gmail.com (D.C.); M.Tanner@ 123456hw.ac.uk (M.G.T.)
                [2 ]EPSRC Proteus IRC Hub, Centre for Inflammation Research, Queen’s Medical Research Institute, University of Edinburgh, 47 Little France Crescent, Edinburgh EH16 4TJ, UK; Tushar.choudhary@ 123456roslin.ed.ac.uk (T.R.C.); Kev.Dhaliwal@ 123456ed.ac.uk (K.D.); Mark.Bradley@ 123456ed.ac.uk (M.B.)
                [3 ]Institute of Biological Chemistry, Biophysics and Bioengineering, School of Engineering & Physical Sciences, Heriot-Watt University, Edinburgh EH14 4AS, UK
                [4 ]School of Chemistry, EaStChem, University of Edinburgh, Joseph Black Building, West Mains Road, Edinburgh EH9 3FF, UK; muhammed.ucuncu@ 123456ikc.edu.tr (M.U.); v1amegia@ 123456exseed.ed.ac.uk (A.M.-F.)
                [5 ]Centre for Photonics and Photonic Materials, University of Bath, Claverton Down, Bath BA27AY, UK; kh1c19@ 123456soton.ac.uk (K.H.); H.Wood@ 123456bath.ac.uk (H.A.C.W.); yufei@ 123456siom.ac.cn (F.Y.)
                Author notes
                [* ]Correspondence: kehrlich@ 123456ed.ac.uk
                [†]

                Current address: Centre for Inflammation Research, Queen’s Medical Research Institute, University of Edinburgh, 47 Little France Crescent, Edinburgh EH16 4TJ, UK.

                [‡]

                Current address: The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush Campus, Midlothian EH25 9RG, UK.

                [§]

                Current address: Department of Analytical Chemistry, Faculty of Pharmacy, Izmir Katip Celebi University, 35620 Izmir, Turkey.

                [‖]

                Current address: Optoelectronics Research Centre, University of Southampton, University Road, Southampton SO17 1BJ, UK.

                [¶]

                Current address: Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou 310024, China.

                Author information
                https://orcid.org/0000-0002-8387-9641
                https://orcid.org/0000-0002-4655-9905
                https://orcid.org/0000-0002-1373-8675
                https://orcid.org/0000-0003-4430-2257
                https://orcid.org/0000-0002-1831-859X
                https://orcid.org/0000-0001-7432-0312
                Article
                sensors-20-06115
                10.3390/s20216115
                7663438
                33121191
                be8eab72-b14f-4fc0-b579-ec421e5f335a
                © 2020 by the authors.

                Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license ( http://creativecommons.org/licenses/by/4.0/).

                History
                : 10 September 2020
                : 20 October 2020
                Categories
                Article

                Biomedical engineering
                fluorescence spectroscopy,time-resolved spectroscopy,optical fibre sensing,biological sensor

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