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      State of the Amphibia 2020: A Review of Five Years of Amphibian Research and Existing Resources

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              ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R

              After more than fifteen years of existence, the R package ape has continuously grown its contents, and has been used by a growing community of users. The release of version 5.0 has marked a leap towards a modern software for evolutionary analyses. Efforts have been put to improve efficiency, flexibility, support for 'big data' (R's long vectors), ease of use and quality check before a new release. These changes will hopefully make ape a useful software for the study of biodiversity and evolution in a context of increasing data quantity.
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                Author and article information

                Journal
                Ichthyology & Herpetology
                Ichthyology & Herpetology
                American Society of Ichthyologists and Herpetologists (ASIH)
                2766-1512
                November 1 2022
                November 3 2022
                : 110
                : 4
                Affiliations
                [1 ]Department of Biology, Utah State University, Logan, Utah 84322; Email: . ORCID: 0000-0002-3346-021X.
                [2 ]Museum of Vertebrate Zoology, University of California, Berkeley, Berkeley, California 94720; Email: (ES) ; (MSK) mkoo@berkeley.edu; (JAM) mcguirej@berkeley.edu; (CS) atrox@berkeley.edu; (VTV) vancevredenburg@gmail.com; and (RDT) rdtarvin@berkeley.ed
                [3 ]Department of Natural History, Florida Museum of Natural History, University of Florida, Gainesville, Florida 32611; Email: . ORCID: 0000-0002-1810-9886.
                [4 ]Department of Integrative Biology, University of Texas at Austin, Austin, Texas 78712; Email: . ORCID: 0000-0001-8675-0520.
                [5 ]Centro de Ornitología y Biodiversidad, Lima, Peru; Email: . ORCID: 0000-0002-3650-4783.
                [6 ]State Key Laboratory of Genetic Resources and Evolution & Yunnan Key Laboratory of Biodiversity and Ecological Security of Gaoligong Mountain, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China; Email: . ORCID: 0000-0003-4246-6
                [7 ]Museo de Zoología, Escuela de Biología, Pontificia Universidad Católica del Ecuador, Quito, Ecuador; Email: . ORCID: 0000-0001-6300-9350.
                Article
                10.1643/h2022005
                7bd68cce-2718-479d-a292-c4dc71dae771
                © 2022
                History

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