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      Machine learning algorithm to predict mortality in critically ill patients with sepsis-associated acute kidney injury

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          Abstract

          This study aimed to establish and validate a machine learning (ML) model for predicting in-hospital mortality in patients with sepsis-associated acute kidney injury (SA-AKI). This study collected data on SA-AKI patients from 2008 to 2019 using the Medical Information Mart for Intensive Care IV. After employing Lasso regression for feature selection, six ML approaches were used to build the model. The optimal model was chosen based on precision and area under curve (AUC). In addition, the best model was interpreted using SHapley Additive exPlanations (SHAP) values and Local Interpretable Model-Agnostic Explanations (LIME) algorithms. There were 8129 sepsis patients eligible for participation; the median age was 68.7 (interquartile range: 57.2–79.6) years, and 57.9% (4708/8129) were male. After selection, 24 of the 44 clinical characteristics gathered after intensive care unit admission remained linked with prognosis and were utilized developing ML models. Among the six models developed, the eXtreme Gradient Boosting (XGBoost) model had the highest AUC, at 0.794. According to the SHAP values, the sequential organ failure assessment score, respiration, simplified acute physiology score II, and age were the four most influential variables in the XGBoost model. Individualized forecasts were clarified using the LIME algorithm. We built and verified ML models that excel in early mortality risk prediction in SA-AKI and the XGBoost model performed best.

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          Deep learning.

          Deep learning allows computational models that are composed of multiple processing layers to learn representations of data with multiple levels of abstraction. These methods have dramatically improved the state-of-the-art in speech recognition, visual object recognition, object detection and many other domains such as drug discovery and genomics. Deep learning discovers intricate structure in large data sets by using the backpropagation algorithm to indicate how a machine should change its internal parameters that are used to compute the representation in each layer from the representation in the previous layer. Deep convolutional nets have brought about breakthroughs in processing images, video, speech and audio, whereas recurrent nets have shone light on sequential data such as text and speech.
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            The Third International Consensus Definitions for Sepsis and Septic Shock (Sepsis-3).

            Definitions of sepsis and septic shock were last revised in 2001. Considerable advances have since been made into the pathobiology (changes in organ function, morphology, cell biology, biochemistry, immunology, and circulation), management, and epidemiology of sepsis, suggesting the need for reexamination.
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              MIMIC-III, a freely accessible critical care database

              MIMIC-III (‘Medical Information Mart for Intensive Care’) is a large, single-center database comprising information relating to patients admitted to critical care units at a large tertiary care hospital. Data includes vital signs, medications, laboratory measurements, observations and notes charted by care providers, fluid balance, procedure codes, diagnostic codes, imaging reports, hospital length of stay, survival data, and more. The database supports applications including academic and industrial research, quality improvement initiatives, and higher education coursework.
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                Author and article information

                Contributors
                panhaifeng@ahmu.edu.cn
                wangdeguang@ahmu.edu.cn
                Journal
                Sci Rep
                Sci Rep
                Scientific Reports
                Nature Publishing Group UK (London )
                2045-2322
                30 March 2023
                30 March 2023
                2023
                : 13
                : 5223
                Affiliations
                [1 ]GRID grid.186775.a, ISNI 0000 0000 9490 772X, Department of Nephrology, The Second Affiliated Hospital of Anhui Medical University, , Anhui Medical University, ; Hefei, People’s Republic of China
                [2 ]GRID grid.186775.a, ISNI 0000 0000 9490 772X, Institute of Kidney Disease, Inflammation and Immunity Mediated Diseases, The Second Affiliated Hospital of Anhui Medical University, , Anhui Medical University, ; Hefei, People’s Republic of China
                [3 ]GRID grid.186775.a, ISNI 0000 0000 9490 772X, Department of Epidemiology and Biostatistics, School of Public Health, , Anhui Medical University, ; Hefei, People’s Republic of China
                [4 ]GRID grid.186775.a, ISNI 0000 0000 9490 772X, Inflammation and Immune Mediated Diseases Laboratory of Anhui Province, ; Hefei, People’s Republic of China
                Article
                32160
                10.1038/s41598-023-32160-z
                10063657
                36997585
                7a1a8a73-a583-4eb6-96f1-3463f8e46cd2
                © The Author(s) 2023

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 30 October 2022
                : 23 March 2023
                Funding
                Funded by: Co-construction project of clinical and preliminary disciplines of Anhui Medical University in 2020
                Award ID: 2020lcxk02
                Funded by: Co-construction project of clinical and preliminary disciplines of Anhui Medical University in 2021
                Award ID: 2021lcxk032
                Funded by: the Natural Science Foundation of Anhui Province
                Award ID: 2008085MH244
                Award Recipient :
                Funded by: Incubation Program of National Natural Science Foundation of China of The Second Hospital of Anhui Medical University
                Award ID: 2020GMFY04
                Award Recipient :
                Funded by: Clinical Research Incubation Program of The Second Hospital of Anhui Medical University
                Award ID: 2020LCZD01
                Award Recipient :
                Categories
                Article
                Custom metadata
                © The Author(s) 2023

                Uncategorized
                medical research,nephrology
                Uncategorized
                medical research, nephrology

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