19
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Spotting Epidemic Keystones by R 0 Sensitivity Analysis: High-Risk Stations in the Tokyo Metropolitan Area

      research-article
      1 , 2 , * , 1 , 3
      PLoS ONE
      Public Library of Science

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          How can we identify the epidemiologically high-risk communities in a metapopulation network? The network centrality measure, which quantifies the relative importance of each location, is commonly utilized for this purpose. As the disease invasion condition is given from the basic reproductive ratio R 0, we have introduced a novel centrality measure based on the sensitivity analysis of this R 0 and shown its capability of revealing the characteristics that has been overlooked by the conventional centrality measures. The epidemic dynamics over the commute network of the Tokyo metropolitan area is theoretically analyzed by using this centrality measure. We found that, the impact of countermeasures at the largest station is more than 1,000 times stronger compare to that at the second largest station, even though the population sizes are only around 1.5 times larger. Furthermore, the effect of countermeasures at every station is strongly dependent on the existence and the number of commuters to this largest station. It is well known that the hubs are the most influential nodes, however, our analysis shows that only the largest among the network plays an extraordinary role. Lastly, we also found that, the location that is important for the prevention of disease invasion does not necessarily match the location that is important for reducing the number of infected.

          Related collections

          Most cited references16

          • Record: found
          • Abstract: found
          • Article: found
          Is Open Access

          Epidemic spreading in scale-free networks

          The Internet, as well as many other networks, has a very complex connectivity recently modeled by the class of scale-free networks. This feature, which appears to be very efficient for a communications network, favors at the same time the spreading of computer viruses. We analyze real data from computer virus infections and find the average lifetime and prevalence of viral strains on the Internet. We define a dynamical model for the spreading of infections on scale-free networks, finding the absence of an epidemic threshold and its associated critical behavior. This new epidemiological framework rationalize data of computer viruses and could help in the understanding of other spreading phenomena on communication and social networks.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            Mitigation strategies for pandemic influenza in the United States.

            Recent human deaths due to infection by highly pathogenic (H5N1) avian influenza A virus have raised the specter of a devastating pandemic like that of 1917-1918, should this avian virus evolve to become readily transmissible among humans. We introduce and use a large-scale stochastic simulation model to investigate the spread of a pandemic strain of influenza virus through the U.S. population of 281 million individuals for R(0) (the basic reproductive number) from 1.6 to 2.4. We model the impact that a variety of levels and combinations of influenza antiviral agents, vaccines, and modified social mobility (including school closure and travel restrictions) have on the timing and magnitude of this spread. Our simulations demonstrate that, in a highly mobile population, restricting travel after an outbreak is detected is likely to delay slightly the time course of the outbreak without impacting the eventual number ill. For R(0) < 1.9, our model suggests that the rapid production and distribution of vaccines, even if poorly matched to circulating strains, could significantly slow disease spread and limit the number ill to <10% of the population, particularly if children are preferentially vaccinated. Alternatively, the aggressive deployment of several million courses of influenza antiviral agents in a targeted prophylaxis strategy may contain a nascent outbreak with low R(0), provided adequate contact tracing and distribution capacities exist. For higher R(0), we predict that multiple strategies in combination (involving both social and medical interventions) will be required to achieve similar limits on illness rates.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Containing pandemic influenza with antiviral agents.

              I Longini (2004)
              For the first wave of pandemic influenza or a bioterrorist influenza attack, antiviral agents would be one of the few options to contain the epidemic in the United States until adequate supplies of vaccine were available. The authors use stochastic epidemic simulations to investigate the effectiveness of targeted antiviral prophylaxis to contain influenza. In this strategy, close contacts of suspected index influenza cases take antiviral agents prophylactically. The authors compare targeted antiviral prophylaxis with vaccination strategies. They model an influenza pandemic or bioterrorist attack for an agent similar to influenza A virus (H2N2) that caused the Asian influenza pandemic of 1957-1958. In the absence of intervention, the model predicts an influenza illness attack rate of 33% of the population (95% confidence interval (CI): 30, 37) and an influenza death rate of 0.58 deaths/1,000 persons (95% Cl: 0.4, 0.8). With the use of targeted antiviral prophylaxis, if 80% of the exposed persons maintained prophylaxis for up to 8 weeks, the epidemic would be contained, and the model predicts a reduction to an illness attack rate of 2% (95% Cl: 0.2, 16) and a death rate of 0.04 deaths/1,000 persons (95% CI: 0.0003, 0.25). Such antiviral prophylaxis is nearly as effective as vaccinating 80% of the population. Vaccinating 80% of the children aged less than 19 years is almost as effective as vaccinating 80% of the population. Targeted antiviral prophylaxis has potential as an effective measure for containing influenza until adequate quantities of vaccine are available.
                Bookmark

                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS One
                PLoS ONE
                plos
                plosone
                PLoS ONE
                Public Library of Science (San Francisco, CA USA )
                1932-6203
                8 September 2016
                2016
                : 11
                : 9
                : e0162406
                Affiliations
                [1 ]Department of Evolutionary Studies of Biosystems, the Graduate University for Advanced Studies (SOKENDAI), Hayama, Kanagawa, Japan
                [2 ]Meiji Institute for Advanced Study of Mathematical Sciences, Meiji University, Nakano, Tokyo, Japan
                [3 ]Evolution and Ecology Program, International Institute for Applied Systems Analysis, Laxenburg, Austria
                Hokkaido University Graduate School of Medicine, JAPAN
                Author notes

                Competing Interests: The authors have declared that no competing interests exist.

                • Conceptualization: KY AS.

                • Data curation: KY.

                • Formal analysis: KY AS.

                • Funding acquisition: AS.

                • Investigation: KY AS.

                • Methodology: KY AS.

                • Project administration: AS.

                • Resources: KY.

                • Software: KY.

                • Validation: KY AS.

                • Visualization: KY.

                • Writing – original draft: KY.

                • Writing – review & editing: KY AS.

                Article
                PONE-D-16-21677
                10.1371/journal.pone.0162406
                5015857
                27607239
                75eeff4f-326c-4b27-95f0-df808262bc63
                © 2016 Yashima, Sasaki

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 30 May 2016
                : 22 August 2016
                Page count
                Figures: 4, Tables: 0, Pages: 19
                Funding
                Funded by: Ministry of Education, Culture, Sports, Science, and Technology (JP)
                Award ID: Grant-in-Aid for Scientific Research on Innovative Areas
                This study was funded by the MEXT Grant-in-Aid for Scientific Research on Innovative Areas 24115001. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Research Article
                Medicine and Health Sciences
                Epidemiology
                Infectious Disease Epidemiology
                Medicine and Health Sciences
                Infectious Diseases
                Infectious Disease Epidemiology
                Computer and Information Sciences
                Network Analysis
                Centrality
                Physical Sciences
                Mathematics
                Algebra
                Linear Algebra
                Eigenvectors
                Medicine and Health Sciences
                Epidemiology
                Spatial Epidemiology
                Computer and Information Sciences
                Network Analysis
                Medicine and Health Sciences
                Infectious Diseases
                Physical Sciences
                Mathematics
                Algebra
                Linear Algebra
                Eigenvalues
                Biology and Life Sciences
                Immunology
                Vaccination and Immunization
                Medicine and Health Sciences
                Immunology
                Vaccination and Immunization
                Medicine and Health Sciences
                Public and Occupational Health
                Preventive Medicine
                Vaccination and Immunization
                Custom metadata
                The commuting data of the Tokyo metropolitan area were acquired from the Urban Transportation Census Report, where the data will be available to all interested researchers upon request from the Japanese Ministry of Land, Infrastructure, Transport and Tourism.

                Uncategorized
                Uncategorized

                Comments

                Comment on this article

                scite_
                5
                1
                9
                0
                Smart Citations
                5
                1
                9
                0
                Citing PublicationsSupportingMentioningContrasting
                View Citations

                See how this article has been cited at scite.ai

                scite shows how a scientific paper has been cited by providing the context of the citation, a classification describing whether it supports, mentions, or contrasts the cited claim, and a label indicating in which section the citation was made.

                Similar content227

                Cited by4

                Most referenced authors230