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      Morphological and molecular characterization of Rhizoctonia solani AG‐3 associated with tobacco target leaf spot in China

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          Abstract

          Tobacco target leaf spot is a leaf disease that seriously affects both the quantity and quality of commercial tobacco crops and has caused huge economic losses in many countries and also pandemics in China since 2006. The anastomosis group‐3 (AG‐3) pathogen is divided into different subgroups namely AG‐3 PT (potato type), AG‐3TB (tobacco type), and AG‐3 TM (tomato type), based on their host and the combined data from the ribosomal DNA internal transcribed spacer (rDNA‐ITS), rDNA intergenic spacer 1 (rDNA‐IGS1) regions, and translation elongation factor 1‐α ( tef‐1α) gene. In this study, we collected tobacco leaves showing target spot symptom from four fields in China. We obtained 49 isolates from southwest China (Yunnan Provinces) and six isolates from northeast China (Liaoning Province). Phylogenetic tree based on rDNA‐ITS region indicated that 51 isolates (49 isolates from Yunnan and two isolates from Liaoning) and 4 isolates from Liaoning belonged to AG‐3 TB and AG‐3 TM, respectively.

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          MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

          We announce the release of an advanced version of the Molecular Evolutionary Genetics Analysis (MEGA) software, which currently contains facilities for building sequence alignments, inferring phylogenetic histories, and conducting molecular evolutionary analysis. In version 6.0, MEGA now enables the inference of timetrees, as it implements the RelTime method for estimating divergence times for all branching points in a phylogeny. A new Timetree Wizard in MEGA6 facilitates this timetree inference by providing a graphical user interface (GUI) to specify the phylogeny and calibration constraints step-by-step. This version also contains enhanced algorithms to search for the optimal trees under evolutionary criteria and implements a more advanced memory management that can double the size of sequence data sets to which MEGA can be applied. Both GUI and command-line versions of MEGA6 can be downloaded from www.megasoftware.net free of charge.
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            Population Biology of the Rhizoctonia solani Complex.

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              Comparison of rDNA-ITS Sequences between Potato and Tobacco Strains in Rhizoctonia solani AG-3

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                Author and article information

                Contributors
                Journal
                Journal of Basic Microbiology
                J Basic Microbiol
                Wiley
                0233-111X
                1521-4028
                February 2023
                December 21 2022
                February 2023
                : 63
                : 2
                : 200-209
                Affiliations
                [1 ] State Key Laboratory for Protection and Utilization of Bio‐Resources in Yunnan Yunnan Agricultural University Kunming Yunnan China
                Article
                10.1002/jobm.202200387
                6017940d-88ec-427f-8eb6-fd04adc580de
                © 2023

                http://onlinelibrary.wiley.com/termsAndConditions#vor

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