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      Systematics and Phylogenetic Interrelationships of the Enigmatic Late Jurassic Shark Protospinax annectans Woodward, 1918 with Comments on the Shark–Ray Sister Group Relationship

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          Abstract

          The Late Jurassic elasmobranch Protospinax annectans is often regarded as a key species to our understanding of crown group elasmobranch interrelationships and the evolutionary history of this group. However, since its first description more than 100 years ago, its phylogenetic position within the Elasmobranchii (sharks and rays) has proven controversial, and a closer relationship between Protospinax and each of the posited superorders (Batomorphii, Squalomorphii, and Galeomorphii) has been proposed over the time. Here we revise this controversial taxon based on new holomorphic specimens from the Late Jurassic Konservat-Lagerstätte of the Solnhofen Archipelago in Bavaria (Germany) and review its skeletal morphology, systematics, and phylogenetic interrelationships. A data matrix with 224 morphological characters was compiled and analyzed under a molecular backbone constraint. Our results indicate a close relationship between Protospinax, angel sharks (Squatiniformes), and saw sharks (Pristiophoriformes). However, the revision of our morphological data matrix within a molecular framework highlights the lack of morphological characters defining certain groups, especially sharks of the order Squaliformes, hampering the phylogenetic resolution of Protospinax annectans with certainty. Furthermore, the monophyly of modern sharks retrieved by molecular studies is only weakly supported by morphological data, stressing the need for more characters to align morphological and molecular studies in the future.

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          Fiji: an open-source platform for biological-image analysis.

          Fiji is a distribution of the popular open-source software ImageJ focused on biological-image analysis. Fiji uses modern software engineering practices to combine powerful software libraries with a broad range of scripting languages to enable rapid prototyping of image-processing algorithms. Fiji facilitates the transformation of new algorithms into ImageJ plugins that can be shared with end users through an integrated update system. We propose Fiji as a platform for productive collaboration between computer science and biology research communities.
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            TNT version 1.5, including a full implementation of phylogenetic morphometrics

            Version 1.5 of the computer program TNT completely integrates landmark data into phylogenetic analysis. Landmark data consist of coordinates (in two or three dimensions) for the terminal taxa; TNT reconstructs shapes for the internal nodes such that the difference between ancestor and descendant shapes for all tree branches sums up to a minimum; this sum is used as tree score. Landmark data can be analysed alone or in combination with standard characters; all the applicable commands and options in TNT can be used transparently after reading a landmark data set. The program continues implementing all the types of analyses in former versions, including discrete and continuous characters (which can now be read at any scale, and automatically rescaled by TNT). Using algorithms described in this paper, searches for landmark data can be made tens to hundreds of times faster than it was possible before (from T to 3T times faster, where T is the number of taxa), thus making phylogenetic analysis of landmarks feasible even on standard personal computers.
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                Author and article information

                Journal
                101520026
                Diversity (Basel)
                Diversity (Basel)
                Diversity
                1424-2818
                1424-2818
                21 February 2023
                08 March 2023
                21 March 2023
                : 15
                : 3
                : 311
                Affiliations
                [1 ]Department of Palaeontology, University of Vienna, Josef-Holaubek-Platz 2, 1090 Vienna, Austria
                [2 ]Vienna Doctoral School of Ecology and Evolution (VDSEE), University of Vienna, Djerassiplatz 1, 1030 Vienna, Austria
                [3 ]Haimuseum und Sammlung R. Kindlimann, 8607 Aathal-Seegräben, Switzerland
                [4 ]School of Science (GAUSS), Georg–August Universität Göttingen, 37077 Göttingen, Germany
                [5 ]Interprospekt Group, 1724 Ferpicloz, Switzerland
                [6 ]Wyoming Dinosaur Center, Thermopolis, WY 82443, USA
                [7 ]Department of Vertebrate Paleontology, American Natural History Museum, New York, NY 10024, USA
                [8 ]Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA
                Author notes
                Author information
                https://orcid.org/0000-0002-4765-5042
                https://orcid.org/0000-0001-5475-6143
                https://orcid.org/0000-0002-8835-6129
                https://orcid.org/0000-0003-0017-8346
                https://orcid.org/0000-0002-3068-3098
                https://orcid.org/0000-0002-1945-2387
                https://orcid.org/0000-0001-9437-7236
                https://orcid.org/0000-0002-8731-2626
                https://orcid.org/0000-0002-6439-8455
                Article
                EMS171120
                10.3390/d15030311
                7614347
                36950326
                5e4d21c5-e8cd-4147-8499-e295a28f1cf7

                This work is licensed under a CC BY 4.0 International license.

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                phylogenetics,elasmobranch evolution,calibration fossil,molecular backbone constraint,hypnosqualea,mesozoic,solnhofen archipelago,konservat-lagerstätte

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