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      Temporal Shifts in Microbial Communities in Nonpregnant African-American Women with and without Bacterial Vaginosis

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          Abstract

          Bacterial vaginosis (BV) has been described as an increase in the number of anaerobic and facultatively anaerobic bacteria relative to lactobacilli in the vaginal tract. Several undesirable consequences of this community shift can include irritation, white discharge, an elevated pH, and increased susceptibility to sexually transmitted infections. While the etiology of the condition remains ill defined, BV has been associated with adverse reproductive and pregnancy outcomes. In order to describe the structure of vaginal communities over time we determined the phylogenetic composition of vaginal communities from seven women sampled at multiple points using 16S rRNA gene sequencing. We found that women with no evidence of BV had communities dominated by lactobacilli that appeared stable over our sampling periods while those with BV had greater diversity and decreased stability overtime. In addition, only Lactobacillus iners was found in BV positive communities.

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          Most cited references49

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            Diversity and productivity in a long-term grassland experiment.

            Plant diversity and niche complementarity had progressively stronger effects on ecosystem functioning during a 7-year experiment, with 16-species plots attaining 2.7 times greater biomass than monocultures. Diversity effects were neither transients nor explained solely by a few productive or unviable species. Rather, many higher-diversity plots outperformed the best monoculture. These results help resolve debate over biodiversity and ecosystem functioning, show effects at higher than expected diversity levels, and demonstrate, for these ecosystems, that even the best-chosen monocultures cannot achieve greater productivity or carbon stores than higher-diversity sites.
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              Microbial diversity and function in soil: from genes to ecosystems.

              Soils sustain an immense diversity of microbes, which, to a large extent, remains unexplored. A range of novel methods, most of which are based on rRNA and rDNA analyses, have uncovered part of the soil microbial diversity. The next step in the era of microbial ecology is to extract genomic, evolutionary and functional information from bacterial artificial chromosome libraries of the soil community genomes (the metagenome). Sophisticated analyses that apply molecular phylogenetics, DNA microarrays, functional genomics and in situ activity measurements will provide huge amounts of new data, potentially increasing our understanding of the structure and function of soil microbial ecosystems, and the interactions that occur within them. This review summarizes the recent progress in studies of soil microbial communities with focus on novel methods and approaches that provide new insight into the relationship between phylogenetic and functional diversity.
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                Author and article information

                Journal
                Interdiscip Perspect Infect Dis
                IPID
                Interdisciplinary Perspectives on Infectious Diseases
                Hindawi Publishing Corporation
                1687-708X
                1687-7098
                2008
                27 January 2009
                : 2008
                : 181253
                Affiliations
                1Department of Biology, Calvin College, 3201 Burton Street, S.E. Grand Rapids, MI 49546, USA
                2Department of Microbiology and Molecular Genetics, Michigan State University, East Lansing, MI 48824, USA
                3Department of Epidemiology, Michigan State University, East Lansing, MI 48824, USA
                Author notes
                *Terence L. Marsh: marsht@ 123456msu.edu

                Recommended by Robert A. Britton

                Article
                10.1155/2008/181253
                2648625
                19277101
                523db44d-eaa1-43fc-bb8d-e13cbd170b66
                Copyright © 2008 John Wertz et al.

                This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 1 July 2008
                : 27 October 2008
                Categories
                Research Article

                Infectious disease & Microbiology
                Infectious disease & Microbiology

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