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      Classification of schizophrenia patients based on resting-state functional network connectivity

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          Abstract

          There is a growing interest in automatic classification of mental disorders based on neuroimaging data. Small training data sets (subjects) and very large amount of high dimensional data make it a challenging task to design robust and accurate classifiers for heterogeneous disorders such as schizophrenia. Most previous studies considered structural MRI, diffusion tensor imaging and task-based fMRI for this purpose. However, resting-state data has been rarely used in discrimination of schizophrenia patients from healthy controls. Resting data are of great interest, since they are relatively easy to collect, and not confounded by behavioral performance on a task. Several linear and non-linear classification methods were trained using a training dataset and evaluate with a separate testing dataset. Results show that classification with high accuracy is achievable using simple non-linear discriminative methods such as k-nearest neighbors (KNNs) which is very promising. We compare and report detailed results of each classifier as well as statistical analysis and evaluation of each single feature. To our knowledge our effects represent the first use of resting-state functional network connectivity (FNC) features to classify schizophrenia.

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          Backpropagation through time: what it does and how to do it

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            Classification of hyperspectral remote sensing images with support vector machines

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              Functional connectivity in single and multislice echoplanar imaging using resting-state fluctuations.

              A previous report of correlations in low-frequency resting-state fluctuations between right and left hemisphere motor cortices in rapidly sampled single-slice echoplanar data is confirmed using a whole-body echoplanar MRI scanner at 1.5 T. These correlations are extended to lower sampling rate multislice echoplanar acquisitions and other right/left hemisphere-symmetric functional cortices. The specificity of the correlations in the lower sampling-rate acquisitions is lower due to cardiac and respiratory-cycle effects which are aliased into the pass-band of the low-pass filter. Data are combined for three normal right-handed male subjects. Correlations to left hemisphere motor cortex, visual cortex, and amygdala are measured in long resting-state scans.
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                Author and article information

                Journal
                Front Neurosci
                Front Neurosci
                Front. Neurosci.
                Frontiers in Neuroscience
                Frontiers Media S.A.
                1662-4548
                1662-453X
                30 July 2013
                2013
                : 7
                : 133
                Affiliations
                [1] 1The Mind Research Network Albuquerque, NM, USA
                [2] 2Department of ECE, University of New Mexico Albuquerque, NM, USA
                [3] 3Department of Psychology and Neuroscience, University of New Mexico Albuquerque, NM, USA
                [4] 4Olin Neuropsychiatry Research Center Hartford, CT, USA
                [5] 5Department of Psychiatry, Yale University School of Medicine New Haven, CT, USA
                Author notes

                Edited by: John Ashburner, UCL Institute of Neurology, UK

                Reviewed by: Andre Marquand, King's College London, UK; Jonas Richiardi, Stanford University, USA

                *Correspondence: Vince D. Calhoun, The Mind Research Network, 1101 Yale Blvd NE, Albuquerque, NM 87106, USA e-mail: vcalhoun@ 123456mrn.org

                This article was submitted to Frontiers in Brain Imaging Methods, a specialty of Frontiers in Neuroscience.

                Article
                10.3389/fnins.2013.00133
                3744823
                23966903
                29cc8aec-780d-47d3-9be8-6452efeac96a
                Copyright © 2013 Arbabshirani, Kiehl, Pearlson and Calhoun.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 28 April 2013
                : 10 July 2013
                Page count
                Figures: 6, Tables: 3, Equations: 14, References: 122, Pages: 16, Words: 12041
                Categories
                Neuroscience
                Original Research Article

                Neurosciences
                functional network connectivity,independent component analysis (ica),classification,schizophrenia,resting-state fmri

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