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      Defining Seropositivity Thresholds for Use in Trachoma Elimination Studies

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          Abstract

          Background

          Efforts are underway to eliminate trachoma as a public health problem by 2020. Programmatic guidelines are based on clinical signs that correlate poorly with Chlamydia trachomatis (Ct) infection in post-treatment and low-endemicity settings. Age-specific seroprevalence of anti Ct Pgp3 antibodies has been proposed as an alternative indicator of the need for intervention. To standardise the use of these tools, it is necessary to develop an analytical approach that performs reproducibly both within and between studies.

          Methodology

          Dried blood spots were collected in 2014 from children aged 1–9 years in Laos (n = 952) and Uganda (n = 2700) and from people aged 1–90 years in The Gambia (n = 1868). Anti-Pgp3 antibodies were detected by ELISA. A number of visual and statistical analytical approaches for defining serological status were compared.

          Principal Findings

          Seroprevalence was estimated at 11.3% (Laos), 13.4% (Uganda) and 29.3% (The Gambia) by visual inspection of the inflection point. The expectation-maximisation algorithm estimated seroprevalence at 10.4% (Laos), 24.3% (Uganda) and 29.3% (The Gambia). Finite mixture model estimates were 15.6% (Laos), 17.1% (Uganda) and 26.2% (The Gambia). Receiver operating characteristic (ROC) curve analysis using a threshold calibrated against external reference specimens estimated the seroprevalence at 6.7% (Laos), 6.8% (Uganda) and 20.9% (The Gambia) when the threshold was set to optimise Youden’s J index. The ROC curve analysis was found to estimate seroprevalence at lower levels than estimates based on thresholds established using internal reference data. Thresholds defined using internal reference threshold methods did not vary substantially between population samples.

          Conclusions

          Internally calibrated approaches to threshold specification are reproducible and consistent and thus have advantages over methods that require external calibrators. We propose that future serological analyses in trachoma use a finite mixture model or expectation-maximisation algorithm as a means of setting the threshold for ELISA data. This will facilitate standardisation and harmonisation between studies and eliminate the need to establish and maintain a global calibration standard.

          Author Summary

          Trachoma is caused by the bacterium Chlamydia trachomatis (Ct). Individuals who have previously been infected with Ct carry specific antibodies in their blood. Recent studies have suggested that these antibodies may be a good way to estimate the intensity of transmission of this bacterium in a population. Among people who do have antibodies (seropositives) there is variation in the amount that is detectable in their blood. Some people have such low levels that differentiating them from those who don’t have antibodies (seronegatives) is challenging. We used a new test for Ct antibodies on blood specimens from three countries. Our test worked extremely well, giving reproducible results when we tested the same samples multiple times. We compared four different methods for setting the position of the threshold line between seronegatives and seropositives. The estimated transmission intensity in each country varied depending on the threshold method used, but two methods that used statistical modelling algorithms to define the two groups performed consistently across all three countries’ samples. We recommend that future studies should consider adopting the statistical modelling approaches, as they are objective tests that require no reference material and allow for standardisation between studies.

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          Most cited references40

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          Index for rating diagnostic tests.

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            A simple system for the assessment of trachoma and its complications.

            A simple grading system for trachoma, based on the presence or absence of five selected "key" signs, has been developed. The method was tested in the field and showed good observer agreement, the most critical point being the identification of severe cases of the disease. It is expected that the system will facilitate the assessment of trachoma and its complications by non-specialist health personnel working at the community level.
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              Is Open Access

              The Global Trachoma Mapping Project: Methodology of a 34-Country Population-Based Study

              ABSTRACT Purpose: To complete the baseline trachoma map worldwide by conducting population-based surveys in an estimated 1238 suspected endemic districts of 34 countries. Methods: A series of national and sub-national projects owned, managed and staffed by ministries of health, conduct house-to-house cluster random sample surveys in evaluation units, which generally correspond to “health district” size: populations of 100,000–250,000 people. In each evaluation unit, we invite all residents aged 1 year and older from h households in each of c clusters to be examined for clinical signs of trachoma, where h is the number of households that can be seen by 1 team in 1 day, and the product h × c is calculated to facilitate recruitment of 1019 children aged 1–9 years. In addition to individual-level demographic and clinical data, household-level water, sanitation and hygiene data are entered into the purpose-built LINKS application on Android smartphones, transmitted to the Cloud, and cleaned, analyzed and ministry-of-health-approved via a secure web-based portal. The main outcome measures are the evaluation unit-level prevalence of follicular trachoma in children aged 1–9 years, prevalence of trachomatous trichiasis in adults aged 15 + years, percentage of households using safe methods for disposal of human feces, and percentage of households with proximate access to water for personal hygiene purposes. Results: In the first year of fieldwork, 347 field teams commenced work in 21 projects in 7 countries. Conclusion: With an approach that is innovative in design and scale, we aim to complete baseline mapping of trachoma throughout the world in 2015.
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                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS Negl Trop Dis
                PLoS Negl Trop Dis
                plos
                plosntds
                PLoS Neglected Tropical Diseases
                Public Library of Science (San Francisco, CA USA )
                1935-2727
                1935-2735
                18 January 2017
                January 2017
                : 11
                : 1
                : e0005230
                Affiliations
                [1 ]Clinical Research Department, London School of Hygiene & Tropical Medicine, London, United Kingdom
                [2 ]Division of Parasitic Diseases and Malaria, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America
                [3 ]Center for Ophthalmology, Ministry of Health, Vientiane, Lao People’s Democratic Republic
                [4 ]Trachoma Control Programme, Ugandan Ministry of Health, Kampala, Uganda
                [5 ]NTD Support Centre, Decatur, Georgia, United States of America
                [6 ]ENVISION PROGRAMME, RTI International, Kampala, Uganda
                [7 ]Medical Research Council Unit The Gambia, Fajara, The Gambia
                [8 ]IHRC, Inc., Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America
                [9 ]Department of Control of Neglected Tropical Diseases, World Health Organization, Geneva, Switzerland
                [10 ]Kilimanjaro Centre for Community Ophthalmology, University Cape Town, Cape Town, South Africa
                [11 ]International Trachoma Initiative, The Task Force for Global Health, Decatur, Georgia, United States of America
                [12 ]MRC Tropical Epidemiology Group, Infectious Disease Epidemiology Department, London School of Hygiene & Tropical Medicine, London, United Kingdom
                Fondation Raoul Follereau, FRANCE
                Author notes

                SG is employed by the commercial company IHRC, Inc. and is a contractor at the Centres for Disease Control and Prevention. The authors have declared that no competing interests exist.

                • Conceptualization: SJM AWS ChR DCWM.

                • Data curation: RW SJM.

                • Formal analysis: SJM ChR RW NDEA.

                • Investigation: SJM KS AH PPR PT HJ PM SL PC DLM GC SG ChR.

                • Methodology: SJM.

                • Resources: DLM GC SG RW MJH ChR.

                • Supervision: KS PC AH SJM ChR DCWM.

                • Visualization: SJM ChR.

                • Writing – original draft: SJM ChR DCWM.

                • Writing – review & editing: SJM DLM ChR AWS MJH DCWM.

                Author information
                http://orcid.org/0000-0003-2049-9040
                Article
                PNTD-D-16-01526
                10.1371/journal.pntd.0005230
                5242428
                28099433
                1b2c8f76-a728-456b-ac4f-d2b50c871bd8

                This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication.

                History
                : 30 August 2016
                : 5 December 2016
                Page count
                Figures: 5, Tables: 4, Pages: 19
                Funding
                Funded by: funder-id http://dx.doi.org/10.13039/100004440, Wellcome Trust;
                Award ID: 098521/B/12/Z
                Award Recipient :
                Funded by: Medical Research Council (GB)
                Award ID: MR/K012126/1
                Award Recipient :
                Funded by: Wellcome Trust (GB)
                Award ID: 105609/Z/14/Z
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/100000200, United States Agency for International Development;
                Award ID: OAA-A-10-00051
                Award Recipient :
                Funded by: United States Agency for International Development (US)
                Award ID: OAA-A-10-00051
                Award Recipient :
                Funded by: Coalition for Operational Research on the NTDs (COR-NTD)
                Award Recipient :
                Funded by: Coalition for Operational Research on the NTDs (COR-NTD)
                Award Recipient :
                Funded by: Coalition for Operational Research on the NTDs (COR-NTD)
                Award Recipient :
                Funded by: Wellcome Trust (GB)
                Award ID: WT098051
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/100004440, Wellcome Trust;
                Award ID: GR079246MA
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/100004440, Wellcome Trust;
                Award ID: WT093368MA
                Award Recipient :
                The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. This work was funded by grants from the Wellcome Trust ( https://wellcome.ac.uk/)(098521/B/12/Z, WT098051, GR079246MA and WT093368MA). ChR is funded by the Wellcome Trust Institutional Strategic Support Fund (105609/Z/14/Z). SJM is funded by the Wellcome Trust. NA receives support from the United Kingdom Medical Research Council (MRC) ( http://www.mrc.ac.uk/) and Department for International Development (DFID) ( https://www.gov.uk/government/organisations/department-for-international-development) (MR/K012126/1). The fieldwork in Laos was supported by the United States Agency for International Development (USAID) ( https://www.usaid.gov/) via its END in Asia project, implemented by FHI360 ( https://www.fhi360.org/) under cooperative agreement number OAA-A-10-00051. The fieldwork in Uganda was supported by the Coalition for Operational Research on the NTDs (COR-NTD) ( http://www.ntdsupport.org/cor-ntd) which is funded at the Task Force for Global Health ( http://www.taskforce.org/) by the Bill & Melinda Gates Foundation ( http://www.gatesfoundation.org/) and by the United States Agency for International Development through its Neglected Tropical Diseases-Support Center Program.
                Categories
                Research Article
                Medicine and Health Sciences
                Infectious Diseases
                Bacterial Diseases
                Trachoma
                Medicine and Health Sciences
                Ophthalmology
                Eye Diseases
                Trachoma
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                Research and Analysis Methods
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                All country files are available from the DataCompass database ( datacompass.lshtm.ac.uk) (accession number disk0/00/00/02/47).

                Infectious disease & Microbiology
                Infectious disease & Microbiology

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