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      Assessment of malaria transmission intensity and insecticide resistance mechanisms in three rural areas of the Moyen Ogooué Province of Gabon

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          Abstract

          Background

          Vector control is considered to be the most successful component of malaria prevention programs and a major contributor to the reduction of malaria incidence over the last two decades. However, the success of this strategy is threatened by the development of resistance to insecticides and behavioural adaptations of vectors. The aim of this study was to monitor malaria transmission and the distribution of insecticide resistance genes in Anopheles populations from three rural areas of the Moyen Ogooué Province of Gabon.

          Methods

          Anopheles spp. were collected using human landing catches in Bindo, Nombakélé and Zilé, three villages located in the surroundings of Lambaréné, during both the rainy and dry seasons. Mosquitoes were identified morphologically, and DNA was extracted from heads and thoraces. Members of the Anopheles gambiae complex were identified by molecular methods using the PCR SINE200 protocol and by sequencing of the internal transcribed spacer 2 region. Taqman assays were used to determine Plasmodium infection and the presence of resistance alleles.

          Results

          Anopheles gambiae sensu lato (97.7%), An. moucheti (1.7%) and An. coustani (0.6%) were the three groups of species collected. Anopheles gambiae sensu stricto (98.5%) and An. coluzzii (1.5%) were the only species of the An. gambiae complex present in the collection. Of the 1235 Anopheles collected, 1193 were collected during the rainy season; these exhibited an exophagic behaviour, and consistently more mosquitoes were collected outdoor than indoor in the three study areas. Of the 1166 Anopheles screened, 26 (2.2%) were infected with Plasmodium species, specifically Plasmodium falciparum (66.7%), P. malariae (15.4%), P. ovale curtisi (11.5%) and P. ovale wallikeri (3.8%) . Malaria transmission intensity was high in Zilé, with an average annual entomological inoculation rate (aEIR) of 243 infective bites per year, while aEIRs in Bindo and Nombakélé were 80.2 and 17 infective bites per year, respectively. Both the L1014F and L1014S mutations were present at frequencies > 95% but no Ace1G119S mutation was found.

          Conclusion

          Our results demonstrate that malaria transmission intensity is heterogeneous in these three rural areas of Moyen Ogooué Province, with areas of high transmission, such as Zilé. The exophagic behaviour of the mosquitoes as well as the high frequency of resistance mutations are serious challenges that need to be addressed by the deployment of control measures adapted to the local setting.

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          Supplementary Information

          The online version contains supplementary material available at 10.1186/s13071-022-05320-9.

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          Most cited references48

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          MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.

          The Molecular Evolutionary Genetics Analysis (Mega) software implements many analytical methods and tools for phylogenomics and phylomedicine. Here, we report a transformation of Mega to enable cross-platform use on Microsoft Windows and Linux operating systems. Mega X does not require virtualization or emulation software and provides a uniform user experience across platforms. Mega X has additionally been upgraded to use multiple computing cores for many molecular evolutionary analyses. Mega X is available in two interfaces (graphical and command line) and can be downloaded from www.megasoftware.net free of charge.
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            A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.

            Some simple formulae were obtained which enable us to estimate evolutionary distances in terms of the number of nucleotide substitutions (and, also, the evolutionary rates when the divergence times are known). In comparing a pair of nucleotide sequences, we distinguish two types of differences; if homologous sites are occupied by different nucleotide bases but both are purines or both pyrimidines, the difference is called type I (or "transition" type), while, if one of the two is a purine and the other is a pyrimidine, the difference is called type II (or "transversion" type). Letting P and Q be respectively the fractions of nucleotide sites showing type I and type II differences between two sequences compared, then the evolutionary distance per site is K = -(1/2) ln [(1-2P-Q) square root of 1-2Q]. The evolutionary rate per year is then given by k = K/(2T), where T is the time since the divergence of the two sequences. If only the third codon positions are compared, the synonymous component of the evolutionary base substitutions per site is estimated by K'S = -(1/2) ln (1-2P-Q). Also, formulae for standard errors were obtained. Some examples were worked out using reported globin sequences to show that synonymous substitutions occur at much higher rates than amino acid-altering substitutions in evolution.
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              Confidence Limits on Phylogenies: An Approach Using the Bootstrap

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                Author and article information

                Contributors
                stravsambe@yahoo.fr
                Tamiratgw2002@yahoo.com
                angegatien@gmail.com
                barclayengossanga@gmail.com
                behmbaroms@gmail.com
                jronaldedoa@gmail.com
                zinaff@gmail.com
                hyjosy@gmail.com
                ulyssus7000@gmail.com
                jcagobe@yahoo.fr
                steffen.borrmann@uni-tuebingen.de
                peter.kremsner@uni-tuebingen.de
                benjamin.mordmueller@radboudumc.nl
                aadegnika@gmail.com
                Journal
                Parasit Vectors
                Parasit Vectors
                Parasites & Vectors
                BioMed Central (London )
                1756-3305
                20 June 2022
                20 June 2022
                2022
                : 15
                : 217
                Affiliations
                [1 ]GRID grid.452268.f, Centre de Recherches Médicales de Lambaréné, ; Lambaréné, Gabon
                [2 ]GRID grid.10392.39, ISNI 0000 0001 2190 1447, Institut für Tropenmedizin, , Eberhard Karls Universität, ; Tübingen, Germany
                [3 ]GRID grid.10419.3d, ISNI 0000000089452978, Department of Parasitology, , Leiden University Medical Center, ; Leiden, the Netherlands
                [4 ]GRID grid.7177.6, ISNI 0000000084992262, Center of Tropical Medicine and Travel Medicine, Department of Infectious Diseases, Division of Internal Medicine, Academic Medical Center (AMC), , University of Amsterdam, ; Amsterdam, the Netherlands
                [5 ]GRID grid.452463.2, German Center for Infection Research (DZIF), partner site Tübingen, ; Tübingen, Germany
                [6 ]GRID grid.10417.33, ISNI 0000 0004 0444 9382, Department of Medical Microbiology, , Radboud University Medical Center (UMC), ; 6524 GA Nijmegen, The Netherlands
                [7 ]Fondation pour la Recherche Scientifique (FORS), Cotonou, Benin
                Author information
                http://orcid.org/0000-0002-7828-0909
                Article
                5320
                10.1186/s13071-022-05320-9
                9208124
                35725630
                15e43a14-c26f-4920-b3ef-7c38f867b3e7
                © The Author(s) 2022

                Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

                History
                : 6 January 2022
                : 10 May 2022
                Funding
                Funded by: Deutsche Forschungsgemeinschaft
                Award ID: MO 1071/12-1
                Award Recipient :
                Funded by: Universitätsklinikum Tübingen (8868)
                Categories
                Research
                Custom metadata
                © The Author(s) 2022

                Parasitology
                anopheles gambiae complex,plasmodium species,entomological inoculation rate,moyen ogooué province,gabon

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